Baked Ratatouille Casserole

Topic: Fresh & Easy Summer Recipes

This baked ratatouille casserole brings together thinly sliced zucchini, yellow squash, eggplant, and tomatoes layered over a rich marinara base infused with garlic, thyme, oregano, and vegetable bouillon. Baking results in tender vegetables with caramelized edges that deliver bold Mediterranean flavors. It pairs beautifully with crusty bread or as a hearty side to grilled meats or fish. The dish is versatile, vegan, paleo-friendly, and suitable for various diets.

Preparation involves salting veggies to reduce moisture, carefully layering for even baking, and covering initially for steam before uncovering to achieve a textured finish. Substitutions like chickpea miso enhance umami flavors while keeping the dish gluten-free. This casserole is perfect for make-ahead meals or weeknight dinners with wholesome, vibrant vegetables.

A woman in a white chef's coat smiles at the camera.
By racha Racha
Last modified on Wed, 19 Nov 2025 21:08:07 GMT
A baked Ratatouille Casserole with a variety of vegetables. Bookmark
A baked Ratatouille Casserole with a variety of vegetables. | recipesbyracha.com

This baked ratatouille casserole is a vibrant celebration of Mediterannean flavors brought to your weeknight table with ease. Thin rounds of zucchini, yellow squash, eggplant, and tomato nestle into a richly seasoned marinara base enhanced with garlic, herbs, and vegetable bouillon. It bakes into tender layers with caramelized edges, perfectly suited for a meatless main, a side dish, or a makeahead crowd pleaser.

When I first made this casserole, the layered presentation and fragrant aroma kept everyone at the table eager to dive in. Now it’s a regular request for potlucks and cozy dinners alike.

Ingredients

  • Zucchini: sliced thin for tender texture and vibrant green color
  • Yellow squash: sliced the same thickness to match zucchini and keep cooking even
  • Eggplant: ideally a slender Japanese or Italian variety, ensures uniform layers and prevents bitterness
  • Tomatoes: sliced thin add juiciness and bright acidity to balance richness
  • Red bell pepper: optional for added sweetness and color contrast
  • Marinara sauce: forms a savory, saucy base that carries herbs and umami
  • Olive oil: for brushing, helping flavors to meld and edges to caramelize beautifully
  • Granulated vegetable bouillon: dissolved in water boosts depth and rounds flavor without adding wateriness
  • Minced garlic: infuses aromatic warmth throughout the layers
  • Dried thyme and oregano: for authentic Mediterranean herby notes
  • Salt and freshly ground black pepper: to season and elevate all components

Instructions

Heat the oven and prep the dish:
Preheat your oven to 375 degrees Fahrenheit. Lightly oil a 9 inch round or similar sized baking dish to prevent sticking and aid in browning.
Choose the right eggplant and slice evenly:
Select a thin, long eggplant such as Japanese or slender Italian. This ensures the rounds will match the zucchini and yellow squash in size and thickness, creating neat, even layers. Use a sharp knife or mandoline to slice the eggplant, zucchini, yellow squash, tomatoes, and optional red bell pepper into rounds about one eighth of an inch thick. Uniform slices help everything cook evenly.
Lay vegetables flat and season first:
Arrange all the vegetable slices flat on a sheet pan or cutting board. Sprinkle evenly with thyme, oregano, black pepper, and salt. Allow them to rest for 10 to 15 minutes. This pulls out surface moisture, resulting in a deeper roasted flavor and preventing watery casserole.
Brush on garlic olive oil:
Stir the minced garlic into two tablespoons of olive oil. Lightly brush both sides of each vegetable slice with this mixture. This step adheres the seasoning and infuses garlic flavor into every layer.
Build the saucy base:
Dissolve the vegetable bouillon granules in two tablespoons of hot water until fully smooth. Stir this mixture into the marinara sauce. Taste the marinara base to decide if additional salt is needed as bouillon can vary in saltiness. Spread the marinara evenly on the bottom of your baking dish.
Assemble the casserole:
Stand the seasoned veggie rounds upright and snugly close together in a repeating color pattern over the marinara base. Pack the slices tight to avoid spaces where steam could make the dish watery. Drizzle the remaining tablespoon of olive oil over the top. This encourages a shiny, roasted finish.
Bake to tender perfection:
Cover the baking dish with a parchment paper sheet tucked just over the vegetables before placing foil on top. The parchment prevents sticking while the foil traps steam, allowing the vegetables to soften without drying. Bake covered for 35 minutes. Then remove the cover and bake uncovered for another 15 to 20 minutes until the vegetables are very tender and the edges caramelize lightly. Let the casserole rest for 10 minutes so the juices thicken and settle.
Make it fully vegan and gluten free:
Choose marinara without cheese and check that your vegetable bouillon is certified gluten free or substitute gluten free chickpea miso. Avoid dairy or wheat based toppings to keep the casserole suitable for all diets.
A baked Ratatouille Casserole with a variety of vegetables.
A baked Ratatouille Casserole with a variety of vegetables. | recipesbyracha.com

My favorite part is how the vegetable layers come together after baking, with edges that caramelize to a sweet, smoky finish. I treasure making this dish with family on weekends when we gather and share stories while the kitchen fills with the aroma of herbs and garlic.

Storage Tips

Store leftovers uncovered or lightly covered in the refrigerator for up to four days. Reheat gently in the oven at 325 degrees Fahrenheit to preserve texture and flavor. For longer storage, freeze portions in airtight containers; thaw in the refrigerator overnight before warming.

Ingredient Substitutions

If you cannot find granulated vegetable bouillon, gluten free chickpea miso is a wonderful substitute added directly to marinara to provide umami and salt depth. Swap the marinara for a homemade tomato sauce simmered with sofrito and sweet paprika for a brighter, more peppery base. Gold zucchini can replace yellow squash to keep the color palette bright with a similar texture that cooks evenly.

Serving Suggestions

Enjoy the casserole alongside crusty artisan bread to mop up the luscious sauce. Serve as a side to grilled fish or steak to add a fresh, seasonal vegetable component, and top with fresh basil leaves or a sprinkle of toasted pine nuts for added texture and aroma.

A baked Ratatouille Casserole with a wooden table.
A baked Ratatouille Casserole with a wooden table. | recipesbyracha.com

Let the casserole rest before serving so the juices settle and flavors deepen. It makes a beautiful makeahead dish for gatherings.

Common Questions About Recipes

→ What vegetables are best for this dish?

Thin rounds of zucchini, yellow squash, eggplant, tomatoes, and optionally red bell pepper provide balanced texture and flavor.

→ How do I prevent watery casserole?

Lightly salting and resting sliced vegetables draws out excess moisture for a firmer, more caramelized finish.

→ Can I make it vegan and gluten-free?

Yes, use vegan marinara sauce and gluten-free vegetable bouillon or chickpea miso to keep it vegan and gluten-free.

→ Why cover the dish with parchment and foil during baking?

Covering traps steam to soften vegetables evenly, then uncovering allows edges to caramelize for added texture.

→ What is the purpose of layering vegetables upright?

Shingling the slices upright ensures even cooking, prevents steaming, and creates an attractive presentation.

→ Any tips for seasoning the marinara base?

Stir vegetable bouillon into warm marinara and taste before adding salt to balance the flavor without overpowering.

Baked Ratatouille Casserole

A tender casserole layered with zucchini, eggplant, tomatoes, and herbs baked to caramelized perfection.

Prep Time
20 minutes
Cooking Time
50 minutes
Total Time
70 minutes
By racha: Racha

Recipe Category: Summer Recipes

Skill Level: Great for Beginners

Culinary Style: Mediterranean

Makes: 4 Servings

Diet Preferences: Vegan-Friendly, Vegetarian-Friendly, No Dairy

What You'll Need

→ Vegetables

01 1 medium zucchini, thinly sliced into 1/8 inch rounds
02 1 medium yellow squash, thinly sliced into 1/8 inch rounds
03 1 medium eggplant, thinly sliced into 1/8 inch rounds
04 2 medium tomatoes, thinly sliced into 1/8 inch rounds
05 1 small red bell pepper, thinly sliced into 1/8 inch rounds (optional)

→ Sauce and Seasoning

06 1 cup marinara sauce
07 3 tablespoons olive oil
08 2 tablespoons granulated vegetable bouillon
09 2 cloves garlic, minced
10 1 teaspoon dried thyme
11 1 teaspoon dried oregano
12 ½ teaspoon salt
13 ¼ teaspoon freshly ground black pepper

Steps to Follow

Step 01

Preheat the oven to 375°F (190°C) and lightly grease a 9-inch round or similar 2-quart baking dish with olive oil.

Step 02

Using a sharp knife or mandoline, slice zucchini, yellow squash, eggplant, tomatoes, and red bell pepper into 1/8-inch thick rounds for even layering.

Step 03

Arrange all slices flat on a sheet pan or cutting board; sprinkle evenly with dried thyme, oregano, salt, and black pepper. Let rest for 10 to 15 minutes to draw out surface moisture.

Step 04

Mix minced garlic into 2 tablespoons of olive oil, then lightly brush both sides of vegetable slices to help seasoning adhere and infuse flavor.

Step 05

Dissolve vegetable bouillon in 2 tablespoons of hot water until smooth. Stir into marinara sauce and adjust salt as needed. Spread the mixture evenly in the bottom of the prepared baking dish.

Step 06

Place the vegetable slices upright and tightly in a repeating color pattern over the marinara base, minimizing gaps to prevent excess moisture.

Step 07

Drizzle the remaining 1 tablespoon of olive oil evenly over the assembled vegetables to encourage caramelization and shine.

Step 08

Cover the dish with parchment paper tucked over the vegetables, then tightly cover with foil. Bake for 35 minutes to gently steam and tenderize.

Step 09

Remove foil and parchment; bake uncovered for an additional 15 to 20 minutes until vegetables are tender and edges caramelize lightly. Let rest 10 minutes before serving to thicken juices.

Additional Tips

  1. Lightly salting the vegetable slices before baking helps extract moisture for a richer, less watery casserole.
  2. Uniform 1/8 inch slicing ensures all vegetables cook evenly and maintain a tender texture.
  3. Using parchment beneath the foil prevents sticking and allows steam circulation without scorching.

Must-Have Gear

  • 9-inch round or 2-quart baking dish
  • Mandoline slicer or sharp knife
  • Sheet pan or large cutting board
  • Brush for applying oil
  • Aluminum foil
  • Parchment paper

Potential Allergy Info

Check product labels for allergens and consult your healthcare provider if unsure.
  • Contains no common allergens but verify vegetable bouillon ingredients for potential allergens

Nutritional Details (Per Portion)

Nutritional info is provided for guidance and isn’t a substitute for professional health advice.
  • Calories: 160
  • Fat: 9 g
  • Carbohydrates: 18 g
  • Protein Content: 3 g